Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015880089.1_cds_XP_016437395.1_33161
CDS Infomation

[gene=LOC107763418] [db_xref=GeneID:107763418] [protein=UPF0481 protein At3g47200-like] [protein_id=XP_016437395.1] [location=complement(join(1807..3228,4641..4724,5059..5130))] [gbkey=CDS]
Sequence

ATGATGGCACAGCATATTGAGATTAGCCCACTGCTTGATCAAACTCCTCCGAATGAAGCT
ACGAAAGATGAGTCGCCAGCTCGCCCGCGGTTGCTAAAGCCTTCACCCACTGCCGCTGCT
TCCTTCTTCGCCTTTGCCGTCGCCAGTCATCAAGTGATACAAGAAGGCGGGAAAGCAGAT
TATATAATCGAGATAAGGACAGCAGATCAAACAAATGAATCAGCAAATCAAGTCTTTGAT
GAAGGATCATCTACCATATTTAAAGTAAATGTGGGGCTATCTGAATCAAATCCAGATGCT
TATACCCCAAAATTGATCTCCATTGGTCCTTACCATAACCAAAATCCGAGACTTCGCTCG
ATGGAAAAATATAAACTGCGTTACCGACAACGGTTTCTGCAGAGGAAAGCGTGGAGAGAT
GTGGAGTATTACTTTAGTGAAATGGAGAAACTAAAGGATGAAGCACTAAAGTGTTACGAT
GATATAAGGGACCTTGACAGTAATATTGTTAGCAAATTTTTAGATTTGCTGTTACTTGAT
GGCTGCTTCGTGGTTGAGTATATACGAGAGTTTTACGAAGGGGTGCCAGAAGGAGAAGAC
AAGATTATCAACGCGGCTTGGATGGAATCTCTGGTAGATCGTGACTTGTTGTTACTAGAA
AACCAACTTCCTTTCTTTATCCTCGCCAAACTTCATGAGATGACTAAGGATCCTACAGAC
GCCCCATTCATACAGATGGTGAAATACAACTTTGGTAGTAGTTTACCAAAAGTGACTCCT
AAATTCATAAATGCTACTGATGATGATGCCGAAGAAATCAAACATTTACTTCAAGTAGTA
CACATGTGTTGTTGCCCTTCAGAGATGAATACTGGCCTAACTAGGAATAGCAGAAAGAAA
AAAGGAAGTAGCAAGAAAAGTTGTAACTGGAATCCTTTGCGAATAGGAAAGTCCAAAAAG
AAGTTTAAAACTAAGGATGGTGACTTATGGCACGATCGCATGCGAAGTGCAACAGAACTT
GATGAAGCTGGAATTCGCTTCTCTAATGTTGGGAAAATTTATAGAAAGTTGAATAAAAAC
AACAAGGAGGATGCTATAAGTTTATTTGATATCAAATTCAATAAGGGATTGCTTGAAATC
CCTTGTTTTGAAGTCATTAATAGTACGGAGACTATCCTGAGAAATCTCATTGCCTACGAA
CAACACTCCTCTGATGTGCATCCAAAATATTTCACGGATTATATAATTTTTATGGACCAT
CTTATTAACTCAGGCAAAGATGTGAATTTGCTTCGGTTGAACGGAATTATCAGAAATAGG
ATAGGAGATGACGAAGAAGTGGCTATTATGTTCAACAAACTAGGAGAAGGTGTCATCCCT
TCAACTGATTTCTTTTACAAAGTGGAATGCAGAAAAGTGATTGAGCATTGTGAAAAACCA
TGGAATGAAAACATGGCAAGTTTGAGGCACAATTATCTTAATAGCCCTTGGGCGAAAATT
TCAACTGCGGCAGCCATCATTCTCCTTCTGCTCACAGTTGCACAAACAGTTCTAGCTTTC
ATCAGTACTTTAAAGTAG

Peptide Sequence

PEP ID

XP_016437395.1
PEP Infomation

PREDICTED: UPF0481 protein At3g47200-like [Nicotiana tabacum]
Sequence

MMAQHIEISPLLDQTPPNEATKDESPARPRLLKPSPTAAASFFAFAVASHQVIQEGGKAD
YIIEIRTADQTNESANQVFDEGSSTIFKVNVGLSESNPDAYTPKLISIGPYHNQNPRLRS
MEKYKLRYRQRFLQRKAWRDVEYYFSEMEKLKDEALKCYDDIRDLDSNIVSKFLDLLLLD
GCFVVEYIREFYEGVPEGEDKIINAAWMESLVDRDLLLLENQLPFFILAKLHEMTKDPTD
APFIQMVKYNFGSSLPKVTPKFINATDDDAEEIKHLLQVVHMCCCPSEMNTGLTRNSRKK
KGSSKKSCNWNPLRIGKSKKKFKTKDGDLWHDRMRSATELDEAGIRFSNVGKIYRKLNKN
NKEDAISLFDIKFNKGLLEIPCFEVINSTETILRNLIAYEQHSSDVHPKYFTDYIIFMDH
LINSGKDVNLLRLNGIIRNRIGDDEEVAIMFNKLGEGVIPSTDFFYKVECRKVIEHCEKP
WNENMASLRHNYLNSPWAKISTAAAIILLLLTVAQTVLAFISTLK

Transcript Sequence

Gene sequence data has not been registered.